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RPMPackage R-repr-0.12-1.lbn25.noarch
String and byte representations for all kinds of R objects
RPMPackage R-rematch-1.0.1-1.lbn25.noarch
A small wrapper on 'regexpr' to extract the matches and captured groups from the match of a regular expression to a character vector.
RPMPackage R-qtl-1.41.6-4.lbn25.x86_64
R-qtl is an extensible, interactive environment for mapping quantitative trait loci (QTLs) in experimental crosses. Our goal is to make complex QTL mapping methods widely accessible and allow users to focus on modeling rather than computing. A key component of computational methods for QTL mapping is the hidden Markov model (HMM) technology for dealing with missing genotype data. We have implemented the main HMM algorithms, with allowance for the presence of genotyping errors, for backcrosses, intercrosses, and phase-known four-way crosses. The current version of R-qtl includes facilities for estimating genetic maps, identifying genotyping errors, and performing single-QTL genome scans and two-QTL, two-dimensional genome scans, by interval mapping (with the EM algorithm), Haley-Knott regression, and multiple imputation. All of this may be done in the presence of covariates (such as sex, age or treatment). One may also fit higher-order QTL models by multiple imputation and Haley-Knott regression.
RPMPackage R-promises-1.0.1-1.lbn25.x86_64
Provides fundamental abstractions for doing asynchronous programming in R using promises. Asynchronous programming is useful for allowing a single R process to orchestrate multiple tasks in the background while also attending to something else. Semantics are similar to 'JavaScript' promises, but with a syntax that is idiomatic R.
RPMPackage R-processx-
Portable tools to run system processes in the background. It can check if a background process is running; wait on a background process to finish; get the exit status of finished processes; kill background processes and their children; restart processes. It can read the standard output and error of the processes, using non-blocking connections. 'processx' can poll a process for standard output or error, with a timeout. It can also poll several processes at once.
RPMPackage R-preprocessCore-1.38.1-3.lbn25.x86_64
A library of core preprocessing routines
RPMPackage R-polynom-1.3.9-1.lbn25.noarch
A collection of functions to implement a class for univariate polynomial
RPMPackage R-polyclip-1.6.1-1.lbn25.x86_64
R port of Angus Johnson's open source library Clipper. Performs polygon clipping operations (intersection, union, set minus, set difference) for polygonal regions of arbitrary complexity, including holes. Computes offset polygons (spatial buffer zones, morphological dilations, Minkowski dilations) for polygonal regions and polygonal lines. Computes Minkowski Sum of general polygons. There is a function for removing self-intersections from polygon data.
RPMPackage R-poLCA-1.4.1-1.lbn25.x86_64
Latent class analysis and latent class regression models for polytomous outcome variables. Also known as latent structure analysis.
RPMPackage R-png-0.1.7-4.lbn25.x86_64
This package provides an easy and simple way to read, write and display bitmap images stored in the PNG format. It can read and write both files and in-memory raw vectors.
RPMPackage R-plyr-1.8.4-5.lbn25.x86_64
A set of tools that solves a common set of problems: you need to break a big problem down into manageable pieces, operate on each piece and then put all the pieces back together. For example, you might want to fit a model to each spatial location or time point in your study, summarise data by panels or collapse high-dimensional arrays to simpler summary statistics. The development of 'plyr' has been generously supported by 'Becton Dickinson'.
RPMPackage R-pkgconfig-2.0.1-1.lbn25.noarch
Set configuration options on a per-package basis. Options set by a given package only apply to that package, other packages are unaffected.
RPMPackage R-pdftools-1.6-1.lbn25.x86_64
Utilities based on 'libpoppler' for extracting text, fonts, attachments and metadata from a PDF file. Also supports high quality rendering of PDF documents into PNG, JPEG, TIFF format, or into raw bitmap vectors for further processing in R.
RPMPackage R-pbdZMQ-0.3.2-1.lbn25.x86_64
'ZeroMQ' is a well-known library for high-performance asynchronous messaging in scalable, distributed applications. This package provides high level R wrapper functions to easily utilize 'ZeroMQ'. We mainly focus on interactive client/server programming frameworks.
RPMPackage R-pbdRPC-0.2.0-1.lbn25.noarch
A very light implementation yet secure for remote procedure calls with unified interface via ssh (OpenSSH).
RPMPackage R-openssl-1.0.1-1.lbn25.x86_64
Bindings to OpenSSL libssl and libcrypto, plus custom SSH pubkey parsers. Supports RSA, DSA and EC curves P-256, P-384 and P-521. Cryptographic signatures can either be created and verified manually or via x509 certificates. AES can be used in cbc, ctr or gcm mode for symmetric encryption; RSA for asymmetric (public key) encryption or EC for Diffie Hellman. High-level envelope functions combine RSA and AES for encrypting arbitrary sized data. Other utilities include key generators, hash functions (md5, sha1, sha256, etc), base64 encoder, a secure random number generator, and 'bignum' math methods for manually performing crypto calculations on large multibyte integers.
RPMPackage R-mvtnorm-1.0.6-3.lbn25.x86_64
This R package computes multivariate normal and t probabilities, quantiles and densities.
RPMPackage R-munsell-0.4.3-1.lbn25.noarch
Provides easy access to, and manipulation of, the Munsell colours. Provides a mapping between Munsell's original notation (e.g. "5R 5/10") and hexadecimal strings suitable for use directly in R graphics. Also provides utilities to explore slices through the Munsell colour tree, to transform Munsell colours and display colour palettes.
RPMPackage R-multtest-2.32.0-3.lbn25.x86_64
Non-parametric bootstrap and permutation resampling-based multiple testing procedures for controlling the family-wise error rate (FWER), generalized family-wise error rate (gFWER), tail probability of the proportion of false positives (TPPFP), and false discovery rate (FDR). Single-step and step-wise methods are implemented. Tests based on a variety of t- and F-statistics (including t-statistics based on regression parameters from linear and survival models) are included. Results are reported in terms of adjusted p-values, confindence regions and test statistic cutoffs. The procedures are directly applicable to identifying differentially expressed genes in DNA microarray experiments. This Library is a part of the Bioconductor ( proejct.
RPMPackage R-msm-1.6.4-3.lbn25.x86_64
Functions for fitting general continuous-time Markov and hidden Markov multi-state models to longitudinal data. Both Markov transition rates and the hidden Markov output process can be modeled in terms of covariates. A variety of observation schemes are supported, including processes observed at arbitrary times, completely-observed processes, and censored states.
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