Modified items

All recently modified items, latest first.

R-car-2.0.19-3.lbn25.noarch: This package accompanies J. Fox, An R and S-PLUS Companion to Applied Regression, Sage, 2002. The package contains mostly functions for applied regression, linear models, and generalized linear models, with an emphasis on regression diagnostics, particularly graphical diagnostic methods. There are also some utility functions. With some exceptions, it does not duplicate capabilities in the basic distribution of R, nor in widely used packages. Where relevant, the functions in car are consistent with na.action = na.omit or na.exclude.

R-biomaRt-2.18.0-6.lbn25.noarch: In recent years a wealth of biological data has become available in public data repositories. Easy access to these valuable data resources and firm integration with data analysis is needed for comprehensive bioinformatics data analysis. biomaRt provides an interface to a growing collection of databases implementing the BioMart software suite (http://www.biomart.org). The package enables retrieval of large amounts of data in a uniform way without the need to know the underlying database schemas or write complex SQL queries. Examples of BioMart databases are Ensembl, COSMIC, Uniprot, HGNC, Gramene, Wormbase and dbSNP mapped to Ensembl. These major databases give biomaRt users direct access to a diverse set of data and enable a wide range of powerful online queries from gene annotation to database mining.

R-affydata-1.16.0-2.lbn25.noarch: Example data sets of a slightly large size. They represent 'real world examples', unlike the artificial examples included in the package affy.

R-abind-1.4.0-12.lbn25.noarch: Combine multi-dimensional arrays. This is a generalization of cbind and rbind. Takes a sequence of vectors, matrices, or arrays and produces a single array of the same or higher dimension.

R-SummarizedExperiment-1.6.3-2.lbn25.noarch: The SummarizedExperiment container contains one or more assays, each represented by a matrix-like object of numeric or other mode. The rows typically represent genomic ranges of interest and the columns represent samples.

R-RUnit-0.4.26-13.lbn25.noarch: R functions implementing a standard Unit Testing framework, with additional code inspection and report generation tools

R-RM2-0.0-18.lbn25.noarch: RM2 is a simple package that implements functions used in revenue management and pricing environments.

R-R6-2.2.2-1.lbn25.noarch: The R6 package allows the creation of classes with reference semantics, similar to R's built-in reference classes. Compared to reference classes, R6 classes are simpler and lighter-weight, and they are not built on S4 classes so they do not require the methods package. These classes allow public and private members, and they support inheritance, even when the classes are defined in different packages.

R-GenomeInfoDbData-1.0.0-1.lbn25.noarch: Files for mapping between NCBI taxonomy ID and species. Used by functions in the GenomeInfoDb package.

R-GenomeInfoDb-1.14.0-1.lbn25.noarch: The Seqnames package contains data and functions that define and allow translation between different chromosome sequence naming conventions (e.g., "chr1" versus "1"), including a function that attempts to place sequence names in their natural, rather than lexicographic, order.

R-DynDoc-1.52.0-1.lbn25.noarch: A set of functions to create and interact with dynamic documents and vignettes.

R-DelayedArray-0.4.1-1.lbn25.noarch: Wrapping an array-like object (typically an on-disk object) in a DelayedArray object allows one to perform common array operations on it without loading the object in memory. In order to reduce memory usage and optimize performance, operations on the object are either delayed or executed using a block processing mechanism. Note that this also works on in-memory array-like objects like DataFrame objects (typically with Rle columns), Matrix objects, and ordinary arrays and data frames.

R-DBI-0.8-1.lbn25.noarch: A database interface (DBI) definition for communication between R and relational database management systems.

R-BiocParallel-1.10.1-2.lbn25.noarch: This package provides modified versions and novel implementation of functions for parallel evaluation, tailored to use with Bioconductor objects.

R-BiocGenerics-0.24.0-1.lbn25.noarch: S4 generic functions needed by many other Bioconductor packages.

R-BSgenome-1.32.0-1.lbn25.noarch: Infrastructure shared by all the Biostrings-based genome data packages

R-BH-devel-1.66.0.1-1.lbn25.noarch: Boost provides free peer-reviewed portable C++ source libraries. A large part of Boost is provided as C++ template code which is resolved entirely at compile-time without linking. This package aims to provide the most useful subset of Boost libraries for template use among CRAN package. By placing these libraries in this package, we offer a more efficient distribution system for CRAN as replication of this code in the sources of other packages is avoided.

R-AnnotationDbi-1.38.2-3.lbn25.noarch: Provides user interface and database connection code for annotation data packages using SQLite data storage.


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